Insertion junction: CLIP2.011084_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011084
Chromosome:chromosome 14
Location:1882600
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g620050 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGTGGATTCTAGGAGTGCTATGGTGATGGGCTGCTGCGGCAGTGCC
Internal bar code:TGAAGATTGTTTGCCTGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCAGTTGGATGAAGGT
Suggested primer 2:AGGGAGCATTTGACGTGGAG