Insertion junction: CLIP2.011088_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011088
Chromosome:chromosome 7
Location:5455511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350900 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGCACACGACGTGCATCGCGACTCGCACAGTCCCACAGTCGCACCC
Internal bar code:TCCTTTCCGCACAACTCCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTTGAAGGGAGGTGGG
Suggested primer 2:GACGCGGACAGTCCTATGAG