Insertion junction: CLIP2.011088_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011088
Chromosome:chromosome 7
Location:5455516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350900 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACCGAATATCAGCCCCACCAGGCCTTGCCCGGTACTCAATGGGCGCC
Internal bar code:TGGCCCTGTATTGTAGTATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2147
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCGGACAGTCCTATGAG
Suggested primer 2:GGACTTTGAAGGGAGGTGGG