Insertion junction: CLIP2.011094_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011094
Chromosome:chromosome 12
Location:2690324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505150 OPR52 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 52 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACGTTATCTCTTGCGCCCCCCCGATGCGTCGGCTGCCAACAGGCTG
Internal bar code:GTTTGCATTACATAACACGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:69.697
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTAGGGGGAG
Suggested primer 2:CTGGCCAATCTGCTGCATTC