Insertion junction: CLIP2.011099_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011099
Chromosome:chromosome 12
Location:1600119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487101 CSV9 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCAGCCGGGCTTGATGGGTTGAGGACACCTTGCTCGCTGCGCCGCC
Internal bar code:CCTACCCTTGGTCTTGCTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2039
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCTGCAAAAGTTGTCG
Suggested primer 2:ACAATTGACACAACAGGCGC