Insertion junction: CLIP2.011100_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011100
Chromosome:chromosome 12
Location:4188786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517850 (1 of 18) PF12906 - RING-variant domain (RINGv) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGGATGTAGCCCAGTACCCAGGACGAGGCGCCCAGCAGCAGCAGGAA
Internal bar code:TTATAAGAGGCTAGAAACCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATCTGTATGGAGTCCC
Suggested primer 2:CATCTATGTCACCCCGCCTC