Insertion junction: CLIP2.011103_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011103
Chromosome:chromosome 16
Location:890598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648150 (1 of 6) PTHR24114//PTHR24114:SF2 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT-CONTAINING PROTEIN 74 CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAAGCAGCCGGGCAAGGGCAGCGGCACTCTTGGGGACCTTCTCACCG
Internal bar code:TCATTGTGCCTTGTCAGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:976
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTAGGATGCGGAGAAGC
Suggested primer 2:GCCAAAACTGTTGCAGGGAG