Insertion junction: CLIP2.011109_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011109
Chromosome:chromosome 4
Location:3959796
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g231516 (1 of 1) PTHR23315//PTHR23315:SF84 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCCACCCACCTGGTTGTCCACGTTCTGCGCCAGCCGCCCCAGCGCAA
Internal bar code:TCCACCTTGCGTCACAGATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGTACCTGCCTACGCCT
Suggested primer 2:GTTGTCCTCGTTCTCAGCCA