Insertion junction: CLIP2.011110_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011110
Chromosome:chromosome 16
Location:6008600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678400 (1 of 1) PTHR22847//PTHR22847:SF412 - WD40 REPEAT PROTEIN // TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCAGGCACTGGCGCATGCAGCTCCGCTGGCGGCGGGGCGGCAGCACC
Internal bar code:TTTAAAGCCGGTTGGACGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCAAACACATACGCG
Suggested primer 2:AAGCAACGAGACGGACCAAT