Insertion junction: CLIP2.011112_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011112
Chromosome:chromosome 13
Location:763488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566750 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCGGTATGTGCAACACATGGTCACGTCTGTGCCGCCTGTTGTAACGT
Internal bar code:CGGCCGCTATAATGTGGAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAATGACGTGCAGCCATG
Suggested primer 2:CAGGTTCCCTTCGCCATCTT