Insertion junction: CLIP2.011112_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011112
Chromosome:chromosome 13
Location:763489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566750 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGGAAGAGGCTTACGGCCCGTCCTCACCCGCCTTCCCGATGAGCAC
Internal bar code:GTAGTCCCCGTGTAATAGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1972
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTCCCTTCGCCATCTT
Suggested primer 2:CTCAATGACGTGCAGCCATG