Insertion junction: CLIP2.011124_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011124
Chromosome:chromosome 4
Location:391067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217912 (1 of 1) PTHR13035//PTHR13035:SF0 - UNCHARACTERIZED // PROTEIN N-TERMINAL GLUTAMINE AMIDOHYDROLASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGGCTGGAGGAGTCAGGCGTGTAGCGCCCATAACACGCACATGCAC
Internal bar code:GGAGCTCCACGTTGGCATGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:37.037
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGGACCTTGACACGGTACTG
Suggested primer 2:TTCCACAATCAGTCTGCCCC