Insertion junction: CLIP2.011126_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011126
Chromosome:chromosome 16
Location:2380186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659500 (1 of 3) 2.4.1.228 - Lactosylceramide 4-alpha-galactosyltransferase / Histo-blood group P(k) UDP-galactose intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTGGTGGTGAGGCGCTGTTGAGGTGGCATACTGGCTCCGGCATAGC
Internal bar code:GTGTGGATTAGCTAAGGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGTAGAGAAGCGGGTCG
Suggested primer 2:CGATAAAGTCCTCCGTCCGG