Insertion junction: CLIP2.011129_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011129
Chromosome:chromosome 3
Location:3993553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171600 XPP1,XPP Exopolyphosphatase; (1 of 2) K03787 - 5'-nucleotidase (surE) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTTCAGCATGTAGCGTGATGGCGGGGTCAGGGCCGATCATCACACC
Internal bar code:ACGTGGTTCCGCAACGGTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3719
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGAGGTCGACCAGTGCTG
Suggested primer 2:AGCGATGTGGGTTGGTGTAG