Insertion junction: CLIP2.011138_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011138
Chromosome:chromosome 3
Location:8650527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209953 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGAAGCGCTTGGCTGCCAGCCATAGTTAGCTGCAGTGGCGATCGCG
Internal bar code:GGCTCAATGGTCGTTAGGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAGGTTTATTCCGCT
Suggested primer 2:GTGGGGATCGGTAAGTTGCA