Insertion junction: CLIP2.011141_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011141
Chromosome:chromosome 10
Location:1682980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429750 FAP417 (1 of 1) IPR000014//IPR000104 - PAS domain // Antifreeze protein, type I; Flagellar Associated Protein 417 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCTATGTGTTCCCCTTCCGCCTGGCCGTGTCCAAGGTGTCGGGCGCC
Internal bar code:GGGTGTGACAATAATGGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATGTACACGTTGGCGGT
Suggested primer 2:TGTGAACGCGGTGGTTATCA