Insertion junction: CLIP2.011143_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011143
Chromosome:chromosome 6
Location:2522357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269350 (1 of 1) K13211 - GC-rich sequence DNA-binding factor (GCFC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGGCTGGGGGACGGCGAGCGGGGGGCGCGGCTGGCGGCGGCGTACGG
Internal bar code:GGGGCGTCGATGTGCCGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:66
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTTTGCAGCAAAGTCG
Suggested primer 2:TGCATGGAACTCTCGCTTGT