Insertion junction: CLIP2.011152_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011152
Chromosome:chromosome 6
Location:4924960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281000 (1 of 52) PF00856 - SET domain (SET) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTGCACAGCCCGGACGGGAGCCGATGCAGGCGCCTCACCCAGTGCC
Internal bar code:GCGATCTCGAAGTACTTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1331
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTGCTATGGCTATGGC
Suggested primer 2:AGGGGGAGTGGAAGGCTTAT