Insertion junction: CLIP2.011157_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011157
Chromosome:chromosome 11
Location:3096959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475150 Similar to PKD2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAACGCCGCACAGGTGAGGCCGGGCCGGGACCTGGTAGCCGGCGATGT
Internal bar code:GTTAGATGTCTGTTTACAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2337
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTGAAGTCGCTTGCTGC
Suggested primer 2:ATGTGCCGGCTGTTTATGGA