Insertion junction: CLIP2.011159_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011159
Chromosome:chromosome 14
Location:3587371
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801659 intron
lncRNA_TCONS_00105207 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGGTAAACGCTCGACAGGTCGTGCGGCGACCCGCCGTAACGCCTCT
Internal bar code:ACAAATGAGCATCCCGTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCGGAGACTGAAATTGG
Suggested primer 2:CGTAGTCAGACAGGGAGTGC