Insertion junction: CLIP2.011165_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011165
Chromosome:chromosome 4
Location:1711251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212250 (1 of 82) IPR020846 - Major facilitator superfamily domain; GT77 family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCTTCGTCGTCTCTCATCCCCGCCCTCATGCCCACCCACGCCCTCA
Internal bar code:TAGTTCTGAGTTCGCGGTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:247
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCCTCATCCACCTATAC
Suggested primer 2:ATTGCTGGACTTTGCGGAGA