Insertion junction: CLIP2.011167_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011167
Chromosome:chromosome 5
Location:152989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00048232

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAGTGTGGTACGGGAATCAAGCACCCCTGCCTGCCACACAGGCACAA
Internal bar code:CGTTTCCCGTATGGCAGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:6312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGATGTCTGGGGTTTGGA
Suggested primer 2:CATTTGTTCGCCCGTGGATC