Insertion junction: CLIP2.011169_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011169
Chromosome:chromosome 3
Location:4431695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175351 LMR2 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCGGGGAGAGCGGCGCCTGGAGGCAAAGCTGCATTCCGCGCAGCAGC
Internal bar code:TATTCTCATCTTACATATCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAACGCCACAGCTTCAT
Suggested primer 2:TGTGTGTGGCAATGCATGTG