Insertion junction: CLIP2.011169_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011169
Chromosome:chromosome 3
Location:4431695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175351 LMR2 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGCCTCCGTCCCCTGCGCCACCGCCGTCTCCCCCATCCTACCCGCCG
Internal bar code:TAGAATCATCCCCATGAGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGGCAATGCATGTG
Suggested primer 2:AGCTAACGCCACAGCTTCAT