Insertion junction: CLIP2.011175_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011175
Chromosome:chromosome 7
Location:1460263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323850 PPP27 (1 of 2) PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCAGACGACGTGCGCGAGGTGCTGAAGCACATGAAGGACCCCATCT
Internal bar code:GTGCAGGATTGGGTATCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5308
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGGCCTGACCATCCTT
Suggested primer 2:TCATGTACCAGCCCGACAAC