Insertion junction: CLIP2.011177_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011177
Chromosome:chromosome 5
Location:1977745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTGCGTGCCGCCACCAGCAACTCGTCACAGGACCAGCCGTAAAGTA
Internal bar code:GCACGTTGCACTGCTTGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3458
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGAGTGAGTGGTTCGTG
Suggested primer 2:ATGGAGGGCATGCATGTGAA