Insertion junction: CLIP2.011178_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.011178
Chromosome:chromosome 9
Location:3682121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397216 (1 of 3) K01832 - thromboxane-A synthase (TBXAS1, CYP5A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGAAGCAGCAGCAGGCGAGGTGGCGGGCATGGCGCACAGCATTACG
Internal bar code:TCGCAGATAGGTCGAGTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GATCGAGCGCTACCTGAGTC
Suggested primer 2:TGCTTCCCTTGCGCTCATTA