Insertion junction: CLIP2.011179_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011179
Chromosome:chromosome 11
Location:1105299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467674 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCCTGCGCCTGCGCCTGAACCAGCACCTGCGCAATACCAGCGCGGC
Internal bar code:GAGTGTCCTTGCTCTGATCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1007
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGGTTGAGTGCAGCAG
Suggested primer 2:GTGCCAGACCTCCAAGTTCA