Insertion junction: CLIP2.011180_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011180
Chromosome:chromosome 8
Location:1200446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363250 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCATCTTACTGCTGTCTTTGCCCGGCCTGGCCCGGACTGTCGCACAA
Internal bar code:TGTTGGTTGCACTGATCAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5156
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGCATGCCTTACCGTC
Suggested primer 2:GTTTTAAAGGGGGAGGGCGA