Insertion junction: CLIP2.011181_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.011181
Chromosome:chromosome 8
Location:47229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358200 ACV4 protein kinase; (1 of 6) PTHR23257//PTHR23257:SF529 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTATATGGGGCGAGGACCAGGCGGCAGCACCGTGGTTGGCCGCGGCGG
Internal bar code:TGTATGTTTATCGTCGATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:67.4419
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTCACTGCCGAAGTTCA
Suggested primer 2:CTCGTACATCATCACGCCGA