Insertion junction: CLIP2.011183_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011183
Chromosome:chromosome 12
Location:4848586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523600 (1 of 3) PTHR13367//PTHR13367:SF8 - TUMOR NECROSIS FACTOR-RELATED // OTU DOMAIN-CONTAINING PROTEIN 7B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGATGTTGTCCACTAGCTTAGAGCCCTGCGGCAGCACTAGGCGGTCCA
Internal bar code:GTTAACCTTATTATCCCTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2830
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:180
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:183

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCCCAAGGACATTACT
Suggested primer 2:ACGCTGACTGCTACCTTTCC