Insertion junction: CLIP2.011194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011194
Chromosome:chromosome 3
Location:1755897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153600 (1 of 1) IPR000104//IPR003034//IPR022656 - Antifreeze protein, type I // SAP domain // XPA C- terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAATGTGGGCGGGCGTCATCACGCGCCTAAAGATAGCATGCATGTGCA
Internal bar code:GCTTGGTATTCACTTATCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2832
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTCGGAGGCAGGGATGA
Suggested primer 2:AGGAAGAGGAGGAGGCAGAG