Insertion junction: CLIP2.011197_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011197
Chromosome:chromosome 6
Location:1997599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265100 (1 of 1) PF00005//PF16326 - ABC transporter (ABC_tran) // ABC transporter C-terminal domain (ABC_tran_CTD); Soluble ABC-F domain containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGGAAAGGCAACAAGAGGCACATGCAGCAAGCCACTGCCGGCCCCGC
Internal bar code:ATGGCCTAGTCTGGTGGACACT

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGCGTTCAACACACATG
Suggested primer 2:TACTGGTGTGCTTGAGCCTG