Insertion junction: CLIP2.011203_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011203
Chromosome:chromosome 6
Location:6342142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCAGATGGGGTGGGGTGGGGCAGGGCACTCCGCACGGCCCTCCACACC
Internal bar code:CGGCTTGTTGAGGGGTCGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAGAAGTGCGTGTACAA
Suggested primer 2:ACTCGCCCACATACCTACCT