Insertion junction: CLIP2.011205_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011205
Chromosome:chromosome 16
Location:1674706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654600 PHC56 (1 of 71) PF12499 - Pherophorin (DUF3707); Pherophorin-chlamydomonas homolog 56 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGGGCAGGGCTGGCACCAGGCGAAGGAGCGGGCGAGCCACCGGGGGC
Internal bar code:TTGTGGAATTGTGTTCCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCGCCTGGTGCCAAC
Suggested primer 2:GAGATGCTGGGCTCAGGG