Insertion junction: CLIP2.011206_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011206
Chromosome:chromosome 2
Location:2774382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094050 PIGO1,PIGO,PIG-O (1 of 1) K05288 - phosphatidylinositol glycan, class O (PIGO); Ethanolamine transferase at GPI Mannose III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACCAGTGGGCCGTCACTGTTCGTAGCCCAAGCGGCCTTATCCACTCC
Internal bar code:CTTGCGTGCGTACTACTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1642
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATGGCACGGAGTTCAG
Suggested primer 2:AGAATCACGACCACAGAGCG