Insertion junction: CLIP2.011207_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.011207
Chromosome:chromosome 1
Location:4216589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028450 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGAATGCATGTGCGTGTGCGACCCTCCCTCCTAAGCGGTTACGCGCA
Internal bar code:CAGCTCGCGTAGTAAGATTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCTCATCCCCTGGAACC
Suggested primer 2:AGCCAAGTTGCAGCCCATAT