Insertion junction: CLIP2.011208_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011208
Chromosome:chromosome 9
Location:3050326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393802 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTGTCGGTTAGCTGACGGCGATTCAGCTCCGGTCAGCTCGCCGTACG
Internal bar code:TAGCCTGTATCTGTGGCCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTTGTCTTCGGAGGTTG
Suggested primer 2:CGGATGGGGTAAACGCGATA