Insertion junction: CLIP2.011210_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011210
Chromosome:chromosome 14
Location:923239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613400 POC16 Proteome of centriole protein 16; (1 of 1) PTHR13720//PTHR13720:SF27 - WD-40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATGATGTAAGCATATGCAAAGCATGCGGTCCCTTTCAGCCACGCACC
Internal bar code:GCTTTATTTACCTCATCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAATCCCCCAACCTTCC
Suggested primer 2:TCAACTCCACACCATTCCCG