Insertion junction: CLIP2.011213_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011213
Chromosome:chromosome 12
Location:9328689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541950 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCTCAGCTTTTGGGATGTTCGGCGTGTGTGGTTGGTGTGGCCGATGG
Internal bar code:TTGACTGGACGAGTATCTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3360
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCACGGTCCCAGTACAG
Suggested primer 2:CTGGTGACATATTGCGTGCG