Insertion junction: CLIP2.011230_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011230
Chromosome:chromosome 6
Location:6342793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293051 AMT1C,AMT3 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCAACGCCTTCATCGGCGACCACAACTTCGCGCTGTCGTACACCAC
Internal bar code:AGCCCATTTTATAATTGGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:763
LEAP-Seq percent confirming:72.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAACAAGGTCAGATGGGG
Suggested primer 2:TACAATTTGTGAGGGCGGCT