Insertion junction: CLIP2.011234_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011234
Chromosome:chromosome 6
Location:3762165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278167 (1 of 1) PTHR21037:SF2 - MCG15614 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAGGCAGAACTCGTGGTAAGTTGCTATGCTGTGAAGGCTCTGTTTGA
Internal bar code:TTGAGTAGTCGATCAAACGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4338
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGAAACGGGTACAGCA
Suggested primer 2:ACCTCGACATCTTGCTTGCA