Insertion junction: CLIP2.011238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.011238
Chromosome:chromosome 3
Location:7663181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204100 ELG5 Exostosin-like glycosyltransferase 5; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGCAAGGCGGCGGTGCAGGGTCCCGAGAAGTCACGTCAGCGGAGAG
Internal bar code:GGAGATACGGGACTAGATCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACGAGGACCAAAGCAC
Suggested primer 2:AGAAGGCGATGTTGGAAGGG