Insertion junction: CLIP2.011239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011239
Chromosome:chromosome 12
Location:6506974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537750 (1 of 1) PTHR22957:SF34 - TBC1 DOMAIN FAMILY MEMBER 25 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAAACACAGCGCCCCTTACCTTCATCGTGTCCACTGCCGTACATGGCG
Internal bar code:CACGGCCTTTCTGGTTGAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGCTTCAACACACCTG
Suggested primer 2:CTGCTTGCTTTTCGCCCTTT