Insertion junction: CLIP2.011240_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.011240
Chromosome:chromosome 1
Location:3369973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021850 HEL2 (1 of 2) PTHR24031:SF249 - ATP-DEPENDENT DNA HELICASE RECG; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATTACACTTCTAAACACACGCACACATGTAGTACATACACACACGTAC
Internal bar code:CGTGTAAGTGTGTTGTATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGGGATGAAAGGGCAA
Suggested primer 2:GGTAGCGGCAGTAGCAGTAG