Insertion junction: CLIP2.011254_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011254
Chromosome:chromosome 3
Location:3374097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166400 (1 of 2) IPR002591//IPR017849//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGCCCCTCCCGGGCTGCCCTCCAACCGCTCAGACATGAGCAGAAT
Internal bar code:ACGAGTACTATGCTGGGAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1701
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGTGGAAACCGGCCAAC
Suggested primer 2:CGGACTACTCACGATTCGGG