Insertion junction: CLIP2.011256_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.011256
Chromosome:chromosome 8
Location:2087761
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369300 P4H16,PFH16,PHX1 Prolyl 4-hydroxylase 16; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCACCTCCCGCACGCGCGGTTAGCGCAAATGCGCGCGTTGTTCGCGCT
Internal bar code:TGCCAGAGTTAGTGCGGTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2556
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAACTGGTCGCACTCCT
Suggested primer 2:GAACAAGGGATGTGGGGAGG