Insertion junction: CLIP2.011256_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011256
Chromosome:chromosome 8
Location:2087762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369300 P4H16,PFH16,PHX1 Prolyl 4-hydroxylase 16; (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCGAGTACATGTGAAGCAATAATGGCTATCCAGTTACAGCGAAAAG
Internal bar code:TGCCAGAGTTAGTGCGGTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1447
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAAGGGATGTGGGGAGG
Suggested primer 2:CATCAACTGGTCGCACTCCT