Insertion junction: CLIP2.011259_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011259
Chromosome:plastome
Location:194496
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATACCTTACGGGAATATAAATACCTTACGGGAATATAAATACCTTACG
Internal bar code:AAGCATTGTAGCTTTGAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:263
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGTTCGCTGACTCACA
Suggested primer 2:ACTTCAACAGCCACTGACGT