Insertion junction: CLIP2.011265_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.011265
Chromosome:chromosome 12
Location:2223524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508853 BPL2 Biotin-protein ligase; (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCCGGGCGTGAGGCTGCCAGCTGGGGCGCAGGTGGCGCAGGTGACG
Internal bar code:AAGCGAAGTCTGCGTAGTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:662
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACATTGCTGCTGTTGCTGT
Suggested primer 2:AGCAGGTAGGCGAGGAACTA